CDS

Accession Number TCMCG025C37059
gbkey CDS
Protein Id XP_021641529.1
Location join(11852..11920,12044..12166,14492..14649,15295..15339,18395..18473,18647..18720,19732..19838,21502..21687,22308..22511,22696..22909,23004..23078,23177..23526,23968..24154,24282..24543,24640..24979,25290..25470,25570..25710,25823..26084,32102..32563,32915..33378,35352..35488,35570..35751,35860..36252,36611..36736,36963..37028,37121..38979,39094..39373,39871..40104,40934..41458,41610..41742,45268..45524)
Gene LOC110636224
GeneID 110636224
Organism Hevea brasiliensis

Protein

Length 2724aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA394253
db_source XM_021785837.1
Definition small subunit processome component 20 homolog isoform X1 [Hevea brasiliensis]

EGGNOG-MAPPER Annotation

COG_category V
Description Small subunit processome component 20 homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14772        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGCCACGCCGTTGCATGCTGTGGGGGTCAAGTCACTGAACAAATCCCCCGGTCGCCGCCGCTTCGTTTTCAAGACTTTCTCCCAGAGAATAGAAGAAGTTGAGATTGATGTATATCGAAGCCTTGATAAAATAAAGCCTGAGCCATCTGAGGGTTCTTCTTTTTTCCGGGATTACCTCGTAGAATGGAGGGAGTTGAATACTGCAGAGGACTTCATCTCGTTTTATGAGAAGATGATGCCCTTGGTACAGACATTACCTTTAGTGCTATTACACAAAGAATCAATTTTGTCAGAACTTCTTTCTAGATTGCAATTGAAAGCACGGCTGTCGCTTGAGCCTATTCTTCGGTTAACTGCAAGTCTATCTAGAGATCTGTTAGAGGATTTCATCTCCTTTTTGCCTAGGATTGCTGATTCATTTTACTCTCTTCTCAAAAGCGGTGCTGATAGGGAGCCAGAGATCATTGAGCAGATTTTTAAATCATGGTCTCATATTCTGATGTATTTGCAAAAATATCTTGTGAAGGATGTTGTACATGTGCTCAAGGTGACAATAAAATTAAGATACTACCCAGAGTGGTACATACAAGAATTTATGGCGGACGCAACATCATTCTTGCTAAGAAATGCTCCTAAAGAGCAACTTAGAAAAGGCATTAGAAAGATCATGTTTGAAATAGTGAATAAACCATTGCCTGCTCGAAAATCTGGAGTCATTGTTTTACTTTATCATATTATGAGAGGGCCCTCATCGAAATTTCATTCAAGAGCAGATTGGGTATTGCAGCTATTGACGGAAAATTCTACATTTAATATTGGTGGTGATAAGTTCAACCAAGGCGTGGACACAGTTATTGAAGTTCTCACTGCTACCTTTAAAAGATTATGTGAAGATCTAGAACCAAAAGAGTTAAATTTGATGTGGAATTGCTTATATAACAGAATAGATGACTCTGTAAATGATGAAGACTACCGGCATCTAAGTTGCCTTTTGTCACTGCTTATATCAACTGTCCAGATCAATAATGGGATGAAAATTTCTGATTACCAGCCAATGATTGAACGAGTAAGGTCATTTGTTCAGAAGTTTATTGTCCCTTCTAGCATTGTGGTGGGACAAGACAATTCTGAAATTGTTGACAAGATTCTGCAGTTAATGCTATGCATTCTTGATGGGCTCAAAAGTTTCAATGACATGTCTACTATCTCCAGCTGTTTGTTGCAGTGGACTCCAGTTTTTGCATTGAGGAACTCAAGTGTTTTGACATTTATTAGGGAACTGCTGGAAAAGGACCCATACATAATACACGCGTCCAGAGTTAATATTTTAAGCGCAATGAATGATTTAATAGAAACTTCACAGGACGAAGTTGTATATCTGATTTGTTCATTGTGTGAGAGACTGCAAAAGAATTCTCTAATTTCTAGCTTCCTAGATGGAACATCTACAGAAGGTCTTTCACGAATTCATGGTTTTCTCCAGGGGGCCATCTGCTCCTGGATTGGGGTGATCAATGATATTAGTCATGGTAATCTAGCATCAACCAGTACTGATGAGGGCAAGTTGGCTCTGCTCTGGGGAATCATCTGTTGCTATCCTCATATGATAGATGTGCGAGCAAGGCCATCCTCGCTAACGGATTTAATAGATGCACTTGATTGCCTTTTGATGATTGAAGATGAAAGTATTGCTGGTGTTTCTAAGCATACTTGGCAAAGCCTGTTGGGGGCTGCTATAAGTTCTTATTACAAACTTGGCAATATATGTGGGCTAGAAGAAACAAGAAAAATTTTGCATCTTGCAAAGACATACAAATCATCCTCACATGTGTTATCTGCTGTTGCTGATTATTTGGACTCTGTGTATGGGCCAATAATGGAGGCAGACAGCCACTGCAAATCTTATCTTCCTGAGTTTGAAACAGAGAAGGCTGTGGATGCATTAGGCATTTTTGCTGATAATTTGTGCAACTCAGATAAGGCAATTCGTGTTGCAACCCTAAGAATTTTGTGCCACTGTGAATGTCATGAATGTAAAATGTCTGCCAATGATCAGCCGCCTGAGAATATAATGAAAACAGAAGGTTATCAGACTCACCCTGCAGAAAGTCATGGGTCTTATGGTGTTAACGTTCTTCAGCTCCTCCTCTCAATTGAAGCAACTCCTCTTTCAATTTCTACAAGCAGGAAAGTTATTCTGTTAATATCTAGAATACAGATGGCCATATCTGCTGGAAAGATATCTGAAACTTATATGCCCATACTTTTGAGTGGAATAATTGGCATTTTCTATAACCGTTTCAGTTATCTATGGAATCCTGCGTCTGAGTGCCTTGCTATTCTGATTAGGGAAAATGTTGCACTTGTATGGGGCAAATTTGTTCATTATTTTGAAGAATGCCTATCTACATTTCATTCACCTCATAATAAGCCTGATGGACAAAGTGCTGAAGTGCCGTACAATTCCTGTGACTTGGTTGAGCGTTTTACTTCATTTGCTGCTCCTACATCTGATAGCACACCCTATGCAACTGTTCTATCCTCATTACTACAGTCTTTACAAAAAATTCCTTCTGTTGCTGAATCTCGATCTCGACAAATTGTACCTCTGTTCTTGAAGTTTTTGGGCTACAACAATGAAGATCTTCTCAGTGTGGGTTCATTCAATTCAGATGCTTGCAAAGGCAAGGAATGGAGAGGTGTCCTAAAAGAATGGTTAAGCCTGTTTAAACTCATGCGGAACCCTAGGGCCTTCTATAGGAGCCAATCTTTAAAAGATGTTCTGCTAATCAGGTTTATGGATGAAAATGATGCTGAAATACAGATGAGGGTTCTTGACTGCCTCTTAACTTGGAAAGATGATTTTTTAATCCCATATGAACAGCATCTGAGAAACTTGATCAGTTCAAAAAATTTGAGAGAAGAACTAACAACGTGGAGTTTGAGCAGAGAATCTTTTCTTATTGAAGAAGAGCACAGAGCTAATCTTGTGCCTATAATTATCCTTATTCTGGTACCAAAAGTGAGAAAACTGAAGATACTTGCCTCTAGGAAGCATACAAGTTTACATCATCGGAAGGCAGTTCTTCGATTCATAGCTCAACTTGATGTCAATGAGATTCCTCTTTTCTTTGCATCGTTAATAAAGCCCTTGCATGATATTTCAAAGGAAGCTGATAGTACCACAAATATATTTTGGACATTACCTAAAAATTCTGTGGATGGACTTCAACCATCAAATATTTTGAAGTACTTCACCTTGGAAAATATCATGGCACTGTCTTGGAAGAAGAAATATGGTTTTCTGCATGTCATTGAAGATATCCTTGGAAGTTTTGATGAATTACATATCAGACCTTTTCTGGATCTGTTAATGGGATGTGTTGTTAGGGTGCTGCAAAGCTGCATTTCAAGTCTCGACCCTGCAAAGGGCACTGGATCTTCTATAAGCAAAAGTCATTCTTTTGTCAGCCTTGAACTGCGTAATGAAGACAGTACTGCCGTAAATCATGCACTGACCAGCTCAACGCTGAAGCAGTTCAAGGATTTGAGGTCTTTGTGTCTGAAAATTGTGTCCCTTGTTATCAATAAGTATGATGATCATGATTTTGATTGCGTATTCTGGGGCATGTTCTTTGCATCAGTAAAACCTTTAATTGACGGTTTCAAGCTGGAGGGTTCCAGTAGTGAGAAACCAAGTTCACTATTCTCATGCTTTTTGGCTATGAGTAGCAGTCGCCACCTTGTACCGCTATTGTCTAGGGAAACGAATCTGGTTCCTGATATTTTCTCGATTCTAACTGTCACTACTGCTTCCAAGGCTATTATATCTTGCGTTCTCAAGTTCATTGAGAACCTGCTGAATCTCAATGAAGAGTTGGATGATGAAGACAATTCAGTGAAGAAGGTTCTATTTCCAAACCTTGACAAACTTATCAGTAGCTTGCACTGTCTGTTTCAGGATGATACTGCAAACAAGAGGAAATTGGCCAAATATCTTGGGGAGACGCATACTAGAATTTTCAAATTGTTGTCGAAGTATATACAAGATCAATTACAGTCAAGGAAGTTTTTGGATATCTTGCTTCCACTGATAGCAACAAGACGTGAAGATTCTGGTGTCTTTGTTGAATGCTTGCAAATTATTCGAGACATAATACCTGTATTAGGAAATGAGTGTACTACCAAAATTCTGAATGTTATCTCTCCACATCTTATTTCTGTTGAGCTGGATATGCGGTTGAACATCTGTGATCTGCTTTATGCTCTTGCTAAAATTGATCCTTCTGTACTCTCAGTGGCAAGCCTTCTTCGTGACTTGAATGCAACCTCTGCAATTGAATTGACTGGCCTTGATTATGACACCATAATCAGTGCATATGAAAAGATAGATGTTGATTTATTCTATACCATCCAAGAAGATCATGCATTAGTTCTCTTGTCACATTTTGTGTATGATATGACATCAGAAGAATTAATTCTAAGGAATAGTGCTTACAGGTCATTGCTTTCTTTTGTTGAATTTTGTGCCTTAATTCTTGATGGAGGGGTTAAGAGTCGATACGAAATCCATCAAGAGATCACAACAGGCAGCAAGTGTTGTTGGACAAAAGCATGTGTTCGGCGCATAATAAACAAGTTTCTTTTGAAGCATATGGGGAACAAAATGAAGGAGGGAGGTTCTGTTAGGAAGGAATGGATTGAGTTATTACGAGATATGGTGTTGAAGCTTCCAGAGGTGGAAAATCTCAATTCCTTCAAAGTGCTGTGCTCTGAGGATGCTGAGCAAGATTTTTTCAACAATATTATTCACTTGCAGAAGCATAGAAGGGCAAGGGCAGTTTTACGCTTTAGTAATATTATCAGTAAAAGTAAGATGTCGGAGGATATCATGAATAAAGTGTTTGTTCCACTCTTGTTTAGTATGTTGTTTGATGAACAAGGTGGAAAGGGAGAACATGTTAAAACTGCATGCATTGAAGCTCTTGCTTCAATATCTGCTCAGATGGAATGGAAGTCTTATTATGCCTTATTGATTAGATGCTTTCGAGAAATGAAGATAAATCTGGACAAGCAGAAGATTGTAGTGCGGCTTATTTGCTCTATATTGGACCAGTTCCATTTTTCACAAAATTGTTTCAGTCTAGAAAACAAAGACTCTGCAGATAGCATTGTAGGCTCTGATAGCACTGAAACAGGTTCTTTCGCTACATTTCACAAATGTGGTGGTAATTATTCAGCTATGCTGCCTAAAGGTAGTTGTTCCGTAATAGCCACTGAAGTACAGGCATGTCTTCAGAAAACTGTGCTCCCTAAGATGCGAAAATTACTGGATTGTGATTCTGATAAGGTCAATGTTAACATCAATGTAGCTGCACTGAAAGTACTGAAGTTGCTTCCAATGGACATAATGGACTCGCAACTTCCAAGTATCATTCATCGCATTGCAAACAATTTAAAGAGCCGTATGGAAAGCATCCGTGATGAAGCTAGGTTTGCTTTGGCTGCTTGTTTAAAGGAGCTTGGCCTGGAATATTTGCAGTTTATAGTCGGGGTTTTGCGAGCTACCTTGAAGCGAGGATATGAGCTCCATGTGTTGGGCTATAGTCTCCATTTTATTTTGTTGAAGTTTCTTTCAAATCCTAAGTGTGGGACGTTGGATTATTGTTTGGAAGACCTCCTTTCTGTGGTAGAGAATGATATTCTTGGAGATGTTGCTGAGGAGAAAGAAGTAGAAAAAATTGCTTCTAAAATGAAAGAAACTAGGAAGCTGAAGTCCTTTGAAACCTTGAAAATAATTTCCCAAAGCATAACATTCAAAACCCATGGCTTGAAATTACTTTCACCAGTTAAAGCTCGCCTGCAGAAGCATCTAACACCCAAAGTGAAAACCAAATTGGAAAGTATGTTAAATCACATATCGGCTGGTATTGAAAGTAATCCATCAGTTGATCAGACTGATCTATTTATTTTTATATATGGGTTTATTGAAGATGGGATCAATCATGAGGATGGTCAAGGTGAGAATTCTTCTGGTACAGAGATGATGCCTCGCCACAGACGAGAGGTTAATGAGAAAACAATTTCTGCAGGCAGAGATAATGGAACTAAATCTGTGTGCTCTCATCTCATTACTGTTTTTGCTCTTGGGCTATTCCACAACCGCATGAAGAGTGTGAAATTGGATAAAAATAATGAAGAACTTCTATCAATGTTGGATCCCTTTGTTAAACTGCTTGGTGACTGCTTGAGTTCTAGGTATGAAGACATTTTGTCTGCATCCCTTAAATGCCTTACACAACTTGTGAGGCTACCTCTGCCATCCCTTGCATCTCAGACAGATAAAATAAAGGTGACATTACTGAGTATTGCCCAAAGTTCTGTGAACTCCAACAATTCTCTGATGCAATCATGTCTAAAAATGTTAACTGTGCTCCTGCGAAGTACTAAGATTACCCTTTCCTCAGAACAACTGCATCTGCTAATTCAGTTTCCACTGTTCATTGATCTTGAGCGGAATCCCTCTTTTGTGGCCCTCTCACTTCTAAAGGCAGTTGTTAATCGCAAGCTGGTTGTTCCTGAGATATATGATGTTATGATGCATATTGCAGAGCTAATGGTTACAAGCCAAGTGGATTCAATTCGCAAGAAATGCAGTCAGATTATGTTGCAATTTTTACTAGATTATCATCTTTCTGGAAAATATTTACAACAACATTTAGATTTTCTGCTGAGGAATTTGAGTTATGAGTATTCAACTGGAAGAGAATCTGTACTTGAAATGCTCCATGCTATAATAGTCAAATTTCCCAGGAACTTTCTGGATAAACATGCACAAACAATATTTATCCATTTGGTGCAATGTTTAGTCAATGACCGTGATAATAAAGTCCGTTCCATGACCGGTACAGTTTTAAAGCTTTTGATTGGACGTGCAAGTCCTCATTTGCTAGATTCCATGTTTGACTTTAGTCTATCTTGGTATATGGATGAAAAGCGGCAAGTCCAGAGCACTGGTGCACAGGTACTGGGATTATTGGTTGAGGTCATGAATAAAAGCTTTCAAAAGCATATCAGCAGTATATTGCCTGTGAGCAAAACCATTTTGCAGGCTGCTGTGGGTGTTGCCAGTGAGAGTCCAGCGCTAGATCTTCATGATGAAGCTGTTCCTCTCTGGAAAGAGGCATATTATTCGTTAGTTTTGTTGGAGAAGATTCTACATCATTTTCATGATCTCAGCTTTGAAAAGGATTTTGAGGATATATGGGAAGCAGTATGTGAGTTGCTCTTACACCCACACCCATGGTTACGCAACATATCAAGTCGCCTTGTGGCAATTTACTATGCTACTGTGACTAAGGCCAGCAAAGAGAGTCATGAAAAAGCATTGGGAACATTTTTCCTTATGAGGCCACATAGGCTTTTTATGATAGCTGTTTCCCTTTGCTGCCAGCTAAAAACACAAGTCATTGATAACGCTGTTGAAAACCTGATTACACAGAATCTTGTCTTTACAATTTCTGCTATTCATTCTCTGATGGGAAAAGTGGAATCTGTGGATCCTTCTACTTTCTGGTCTACGCTTGAACAGCATGAACAAGGCCAATTTCTTAAAGCCTTTCAGTTGCTTGATGCAAGAAAAGGAAAAGACATCTTTTTAAAAGTTATATCTGGTGTCCATGACCAAGATTATGGAGACCGTTGTGAGAATCTCCAATATTTGCTCCTCTCTAATTTGATTAAAAAAATGGGGAAAATTGCTCTTCAAAAGGAGGCTATTCAGATGAAAATCATCTTCAATACTTTTGGAAAGATTTCTTTACAAATAGAACAGGACAAGTTACAGAAGCATGCATTTGACATGCTGTTACCGTTGTATAAAGTTTGTGAAGGATTTGCTGGGAAAGTTGTCACTGATGAATTGAAGCTGCTAGCGGAAGAGGTTTGCAAAAGTATGCGGAATGCTTTGGGCATCCACAATTTTGTACAGGTTTATAGTGAGATGAGGAGAAGTATCAAGGTGAAGAGAGAAAAGAGGAAGCGAGAGGAAAAGGTCATGGCTGTTGTGAACCCAATGCGGAATGCTAAGAGGAAGCTACGGATTGCAGCGAAGCATCGTGCACACAAGAGAAGGAAGATAATGACAATGAAAATGGGAAGATGGATGCATTAA
Protein:  
MATPLHAVGVKSLNKSPGRRRFVFKTFSQRIEEVEIDVYRSLDKIKPEPSEGSSFFRDYLVEWRELNTAEDFISFYEKMMPLVQTLPLVLLHKESILSELLSRLQLKARLSLEPILRLTASLSRDLLEDFISFLPRIADSFYSLLKSGADREPEIIEQIFKSWSHILMYLQKYLVKDVVHVLKVTIKLRYYPEWYIQEFMADATSFLLRNAPKEQLRKGIRKIMFEIVNKPLPARKSGVIVLLYHIMRGPSSKFHSRADWVLQLLTENSTFNIGGDKFNQGVDTVIEVLTATFKRLCEDLEPKELNLMWNCLYNRIDDSVNDEDYRHLSCLLSLLISTVQINNGMKISDYQPMIERVRSFVQKFIVPSSIVVGQDNSEIVDKILQLMLCILDGLKSFNDMSTISSCLLQWTPVFALRNSSVLTFIRELLEKDPYIIHASRVNILSAMNDLIETSQDEVVYLICSLCERLQKNSLISSFLDGTSTEGLSRIHGFLQGAICSWIGVINDISHGNLASTSTDEGKLALLWGIICCYPHMIDVRARPSSLTDLIDALDCLLMIEDESIAGVSKHTWQSLLGAAISSYYKLGNICGLEETRKILHLAKTYKSSSHVLSAVADYLDSVYGPIMEADSHCKSYLPEFETEKAVDALGIFADNLCNSDKAIRVATLRILCHCECHECKMSANDQPPENIMKTEGYQTHPAESHGSYGVNVLQLLLSIEATPLSISTSRKVILLISRIQMAISAGKISETYMPILLSGIIGIFYNRFSYLWNPASECLAILIRENVALVWGKFVHYFEECLSTFHSPHNKPDGQSAEVPYNSCDLVERFTSFAAPTSDSTPYATVLSSLLQSLQKIPSVAESRSRQIVPLFLKFLGYNNEDLLSVGSFNSDACKGKEWRGVLKEWLSLFKLMRNPRAFYRSQSLKDVLLIRFMDENDAEIQMRVLDCLLTWKDDFLIPYEQHLRNLISSKNLREELTTWSLSRESFLIEEEHRANLVPIIILILVPKVRKLKILASRKHTSLHHRKAVLRFIAQLDVNEIPLFFASLIKPLHDISKEADSTTNIFWTLPKNSVDGLQPSNILKYFTLENIMALSWKKKYGFLHVIEDILGSFDELHIRPFLDLLMGCVVRVLQSCISSLDPAKGTGSSISKSHSFVSLELRNEDSTAVNHALTSSTLKQFKDLRSLCLKIVSLVINKYDDHDFDCVFWGMFFASVKPLIDGFKLEGSSSEKPSSLFSCFLAMSSSRHLVPLLSRETNLVPDIFSILTVTTASKAIISCVLKFIENLLNLNEELDDEDNSVKKVLFPNLDKLISSLHCLFQDDTANKRKLAKYLGETHTRIFKLLSKYIQDQLQSRKFLDILLPLIATRREDSGVFVECLQIIRDIIPVLGNECTTKILNVISPHLISVELDMRLNICDLLYALAKIDPSVLSVASLLRDLNATSAIELTGLDYDTIISAYEKIDVDLFYTIQEDHALVLLSHFVYDMTSEELILRNSAYRSLLSFVEFCALILDGGVKSRYEIHQEITTGSKCCWTKACVRRIINKFLLKHMGNKMKEGGSVRKEWIELLRDMVLKLPEVENLNSFKVLCSEDAEQDFFNNIIHLQKHRRARAVLRFSNIISKSKMSEDIMNKVFVPLLFSMLFDEQGGKGEHVKTACIEALASISAQMEWKSYYALLIRCFREMKINLDKQKIVVRLICSILDQFHFSQNCFSLENKDSADSIVGSDSTETGSFATFHKCGGNYSAMLPKGSCSVIATEVQACLQKTVLPKMRKLLDCDSDKVNVNINVAALKVLKLLPMDIMDSQLPSIIHRIANNLKSRMESIRDEARFALAACLKELGLEYLQFIVGVLRATLKRGYELHVLGYSLHFILLKFLSNPKCGTLDYCLEDLLSVVENDILGDVAEEKEVEKIASKMKETRKLKSFETLKIISQSITFKTHGLKLLSPVKARLQKHLTPKVKTKLESMLNHISAGIESNPSVDQTDLFIFIYGFIEDGINHEDGQGENSSGTEMMPRHRREVNEKTISAGRDNGTKSVCSHLITVFALGLFHNRMKSVKLDKNNEELLSMLDPFVKLLGDCLSSRYEDILSASLKCLTQLVRLPLPSLASQTDKIKVTLLSIAQSSVNSNNSLMQSCLKMLTVLLRSTKITLSSEQLHLLIQFPLFIDLERNPSFVALSLLKAVVNRKLVVPEIYDVMMHIAELMVTSQVDSIRKKCSQIMLQFLLDYHLSGKYLQQHLDFLLRNLSYEYSTGRESVLEMLHAIIVKFPRNFLDKHAQTIFIHLVQCLVNDRDNKVRSMTGTVLKLLIGRASPHLLDSMFDFSLSWYMDEKRQVQSTGAQVLGLLVEVMNKSFQKHISSILPVSKTILQAAVGVASESPALDLHDEAVPLWKEAYYSLVLLEKILHHFHDLSFEKDFEDIWEAVCELLLHPHPWLRNISSRLVAIYYATVTKASKESHEKALGTFFLMRPHRLFMIAVSLCCQLKTQVIDNAVENLITQNLVFTISAIHSLMGKVESVDPSTFWSTLEQHEQGQFLKAFQLLDARKGKDIFLKVISGVHDQDYGDRCENLQYLLLSNLIKKMGKIALQKEAIQMKIIFNTFGKISLQIEQDKLQKHAFDMLLPLYKVCEGFAGKVVTDELKLLAEEVCKSMRNALGIHNFVQVYSEMRRSIKVKREKRKREEKVMAVVNPMRNAKRKLRIAAKHRAHKRRKIMTMKMGRWMH